format.cpp
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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright 2012 The MITRE Corporation *
* *
* Licensed under the Apache License, Version 2.0 (the "License"); *
* you may not use this file except in compliance with the License. *
* You may obtain a copy of the License at *
* *
* http://www.apache.org/licenses/LICENSE-2.0 *
* *
* Unless required by applicable law or agreed to in writing, software *
* distributed under the License is distributed on an "AS IS" BASIS, *
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. *
* See the License for the specific language governing permissions and *
* limitations under the License. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#include <QDate>
#ifndef BR_EMBEDDED
#include <QNetworkAccessManager>
#include <QNetworkReply>
#include <QtXml>
#endif // BR_EMBEDDED
#include <opencv2/highgui/highgui.hpp>
#include <openbr_plugin.h>
#include "core/bee.h"
#include "core/opencvutils.h"
#include "core/qtutils.h"
using namespace br;
using namespace cv;
/*!
* \ingroup formats
* \brief Reads a comma separated value file.
* \author Josh Klontz \cite jklontz
*/
class csvFormat : public Format
{
Q_OBJECT
Template read() const
{
QFile f(file.name);
f.open(QFile::ReadOnly);
QStringList lines(QString(f.readAll()).split('\n'));
f.close();
bool isUChar = true;
QList< QList<float> > valsList;
foreach (const QString &line, lines) {
QList<float> vals;
foreach (const QString &word, line.split(QRegExp(" *, *"))) {
bool ok;
const float val = word.toFloat(&ok);
vals.append(val);
isUChar = isUChar && (val == float(uchar(val)));
}
valsList.append(vals);
}
assert((valsList.size() > 0) && (valsList[0].size() > 0));
Mat m(valsList.size(), valsList[0].size(), CV_32FC1);
for (int i=0; i<valsList.size(); i++) {
assert(valsList[i].size() == valsList[0].size());
for (int j=0; j<valsList[i].size(); j++) {
m.at<float>(i,j) = valsList[i][j];
}
}
if (isUChar) m.convertTo(m, CV_8U);
return Template(m);
}
void write(const Template &t) const
{
const Mat &m = t.m();
if (t.size() != 1) qFatal("csvFormat::write only supports single matrix templates.");
if (m.channels() != 1) qFatal("csvFormat::write only supports single channel matrices.");
QStringList lines; lines.reserve(m.rows);
for (int r=0; r<m.rows; r++) {
QStringList elements; elements.reserve(m.cols);
for (int c=0; c<m.cols; c++)
elements.append(OpenCVUtils::elemToString(m, r, c));
lines.append(elements.join(","));
}
QtUtils::writeFile(file, lines);
}
};
BR_REGISTER(Format, csvFormat)
/*!
* \ingroup formats
* \brief Reads image files.
* \author Josh Klontz \cite jklontz
*/
class DefaultFormat : public Format
{
Q_OBJECT
Template read() const
{
Template t;
if (file.name.startsWith("http://") || file.name.startsWith("www.")) {
#ifndef BR_EMBEDDED
QNetworkAccessManager networkAccessManager;
QNetworkRequest request(file.name);
request.setAttribute(QNetworkRequest::CacheLoadControlAttribute, QNetworkRequest::AlwaysNetwork);
QNetworkReply *reply = networkAccessManager.get(request);
while (!reply->isFinished()) QCoreApplication::processEvents();
if (reply->error()) qWarning("Url::read %s (%s).\n", qPrintable(reply->errorString()), qPrintable(QString::number(reply->error())));
QByteArray data = reply->readAll();
delete reply;
Mat m = imdecode(Mat(1, data.size(), CV_8UC1, data.data()), 1);
if (m.data) t.append(m);
#endif // BR_EMBEDDED
} else {
QString prefix = "";
if (!QFileInfo(file.name).exists()) prefix = file.getString("path") + "/";
Mat m = imread((prefix+file.name).toStdString());
if (m.data) t.append(m);
}
return t;
}
void write(const Template &t) const
{
imwrite(file.name.toStdString(), t);
}
};
BR_REGISTER(Format, DefaultFormat)
/*!
* \ingroup formats
* \brief Reads a NIST BEE similarity matrix.
* \author Josh Klontz \cite jklontz
*/
class mtxFormat : public Format
{
Q_OBJECT
Template read() const
{
return BEE::readSimmat(file);
}
void write(const Template &t) const
{
BEE::writeSimmat(t, file);
}
};
BR_REGISTER(Format, mtxFormat)
/*!
* \ingroup formats
* \brief Reads a NIST BEE mask matrix.
* \author Josh Klontz \cite jklontz
*/
class maskFormat : public Format
{
Q_OBJECT
Template read() const
{
return BEE::readMask(file);
}
void write(const Template &t) const
{
BEE::writeMask(t, file);
}
};
BR_REGISTER(Format, maskFormat)
/*!
* \ingroup formats
* \brief MATLAB <tt>.mat</tt> format.
* \author Josh Klontz \cite jklontz
* http://www.mathworks.com/help/pdf_doc/matlab/matfile_format.pdf
*/
class matFormat : public Format
{
Q_OBJECT
struct Element
{
quint32 type, bytes;
QByteArray data;
Element() : type(0), bytes(0) {}
Element(QDataStream &stream)
: type(0), bytes(0)
{
bool error = false;
error |= (stream.readRawData((char*)&type, 4) != 4);
if (type >= 1 << 16) {
// Small data format
bytes = type;
type = type & 0x0000FFFF;
bytes = bytes >> 16;
} else {
// Regular format
error |= (stream.readRawData((char*)&bytes, 4) != 4);
}
data.resize(bytes);
error |= (int(bytes) != stream.readRawData(data.data(), bytes));
// Alignment
int skipBytes = (bytes < 4) ? (4 - bytes) : 0;
if (skipBytes != 0) error |= (skipBytes != stream.skipRawData(skipBytes));
if (error) qFatal("matFormat::Element Unexpected end of file.");
}
void print() const
{
qDebug() << "matFormat::Element" << type << bytes << data.size();
}
};
Template read() const
{
QByteArray byteArray;
QtUtils::readFile(file, byteArray);
QDataStream f(byteArray);
{ // Check header
QByteArray header(128, 0);
f.readRawData(header.data(), 128);
if (!header.startsWith("MATLAB 5.0 MAT-file"))
qFatal("matFormat::read Invalid MAT header.");
}
Template t(file);
while (!f.atEnd()) {
Element element(f);
// miCOMPRESS
if (element.type == 15) {
element.data.prepend((char*)&element.bytes, 4); // Qt zlib wrapper requires this to preallocate the buffer
QDataStream uncompressed(qUncompress(element.data));
element = Element(uncompressed);
}
// miMATRIX
if (element.type == 14) {
QDataStream matrix(element.data);
qint32 rows = 0, columns = 0;
int matrixType = 0;
QByteArray matrixData;
while (!matrix.atEnd()) {
Element subelement(matrix);
if (subelement.type == 5) { // Dimensions array
if (subelement.bytes == 8) {
rows = ((qint32*)subelement.data.data())[0];
columns = ((qint32*)subelement.data.data())[1];
} else {
qWarning("matFormat::read can only handle 2D arrays.");
}
} else if (subelement.type == 7) { //miSINGLE
matrixType = CV_32FC1;
matrixData = subelement.data;
} else if (subelement.type == 9) { //miDOUBLE
matrixType = CV_64FC1;
matrixData = subelement.data;
}
}
if ((rows > 0) && (columns > 0) && (matrixType != 0) && !matrixData.isEmpty())
t.append(Mat(rows, columns, matrixType, matrixData.data()).clone());
}
}
return t;
}
void write(const Template &t) const
{
}
};
BR_REGISTER(Format, matFormat)
/*!
* \ingroup formats
* \brief Retrieves an image from a webcam.
* \author Josh Klontz \cite jklontz
*/
class webcamFormat : public Format
{
Q_OBJECT
Template read() const
{
static QScopedPointer<VideoCapture> videoCapture;
if (videoCapture.isNull())
videoCapture.reset(new VideoCapture(0));
Mat m;
videoCapture->read(m);
return Template(m);
}
void write(const Template &t) const
{
(void) t;
qFatal("webcamFormat::write not supported.");
}
};
BR_REGISTER(Format, webcamFormat)
#ifndef BR_EMBEDDED
/*!
* \ingroup formats
* \brief Decodes images from Base64 xml
* \author Scott Klum \cite sklum
* \author Josh Klontz \cite jklontz
*/
class xmlFormat : public Format
{
Q_OBJECT
Template read() const
{
QDomDocument doc(file);
QFile f(file);
if (!f.open(QIODevice::ReadOnly)) qFatal("xmlFormat::read unable to open %s for reading.", qPrintable(file.flat()));
if (!doc.setContent(&f)) qFatal("xmlFormat::read unable to parse %s.", qPrintable(file.flat()));
f.close();
Template t;
QDomElement docElem = doc.documentElement();
QDomNode subject = docElem.firstChild();
while (!subject.isNull()) {
QDomNode fileNode = subject.firstChild();
while (!fileNode.isNull()) {
QDomElement e = fileNode.toElement();
if (e.tagName() == "FORMAL_IMG") {
QByteArray byteArray = QByteArray::fromBase64(qPrintable(e.text()));
Mat m = imdecode(Mat(1, byteArray.size(), CV_8UC1, byteArray.data()), CV_LOAD_IMAGE_ANYDEPTH);
if (!m.data) qWarning("xmlFormat::read failed to decode image data.");
t.append(m);
} else if ((e.tagName() == "RELEASE_IMG") ||
(e.tagName() == "PREBOOK_IMG") ||
(e.tagName() == "LPROFILE") ||
(e.tagName() == "RPROFILE")) {
// Ignore these other image fields for now
} else {
t.file.insert(e.tagName(), e.text());
}
fileNode = fileNode.nextSibling();
}
subject = subject.nextSibling();
}
// Calculate age
if (t.file.contains("DOB")) {
const QDate dob = QDate::fromString(t.file.getString("DOB").left(10), "yyyy-MM-dd");
const QDate current = QDate::currentDate();
int age = current.year() - dob.year();
if (current.month() < dob.month()) age--;
t.file.insert("Age", age);
}
return t;
}
void write(const Template &t) const
{
(void) t;
qFatal("xmlFormat::write not supported.");
}
};
BR_REGISTER(Format, xmlFormat)
#endif // BR_EMBEDDED
#include "format.moc"