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* add ability to specify deprecated or retired options. * add retired example and tests * update some formatting and a few more test executions * fix formatting on retired.cpp * add another test to fill coverage gap for existing options that are being retired. * add example comments * Update readme with the descriptions of the new helper functions * fix space on readme * Apply suggestions from code review Co-Authored-By: Christoph Bachhuber <cbachhuber89@gmail.com> * add some flags to the code coverage report and update some names and add more descriptions to deprecated options * update formatting on App
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* Adding first try at coverage * Fix for CMakeLists * Fix for wrong shell * Fixes to Coverage * Fix for missing coverage * Adding badge * Using repo token * Adding test files to coverage * Fix typo * Adding codecov * Fix for code coverage * Fix single file tests under CodeCov * Seperating coverage steps * Fix testrunner to be ctest * Fix constant rebuilding of doxygen * Adding coverage, tested locally * Adding compiler version to gcov * Fixing code coverage gcov download and use * Adding Coverage build type with some fixes * Better way of using gcc * Adding coverage badge * Removing tests from calcs