OpenSystemsDevelopment / qpdf

* Replace --create-from-json=file with --json-input, which causes the
  regular input to be treated as json.
* Eliminate --to-json
* In --json=2, bring back "objects" and eliminate "objectinfo". Stream
  data is never present.
* In --json-output=2, write "qpdf-v2" with "objects" and include
  stream data.

There are no automated tests yet, but committing work so far in
preparation for some refactoring.

Also add stubs for top-level QPDF methods (createFromJSON,
updateFromJSON)

* Merge overloaded functions by adding default values
* Remove non-const methods that are identical to const methods

(patrepl and cleanpatch are my own utilities)

patrepl s/PointerHolder/std::shared_ptr/g {include,libqpdf}/qpdf/*.hh
patrepl s/PointerHolder/std::shared_ptr/g libqpdf/*.cc
patrepl s/make_pointer_holder/std::make_shared/g libqpdf/*.cc
patrepl s/make_array_pointer_holder/QUtil::make_shared_array/g libqpdf/*.cc
patrepl s,qpdf/std::shared_ptr,qpdf/PointerHolder, **/*.cc **/*.hh
git restore include/qpdf/PointerHolder.hh
cleanpatch
./format-code

Run this:

for i in  **/*.cc **/*.c **/*.h **/*.hh; do
  clang-format < $i >| $i.new && mv $i.new $i
done

This comment expands all tabs using an 8-character tab-width. You
should ignore this commit when using git blame or use git blame -w.

In the early days, I used to use tabs where possible for indentation,
since emacs did this automatically. In recent years, I have switched
to only using spaces, which means qpdf source code has been a mixture
of spaces and tabs. I have avoided cleaning this up because of not
wanting gratuitous whitespaces change to cloud the output of git
blame, but I changed my mind after discussing with users who view qpdf
source code in editors/IDEs that have other tab widths by default and
in light of the fact that I am planning to start applying automatic
code formatting soon.

None of these are in the public API.

This was originally not public because I wanted to get rid fo the
pages cache, but I recently realized there were deep reasons not to do
that, and the author of pikepdf wanted this, so I decided to make it
public.

This results in a performance penalty of 1% to 2% when replaceObject
and swapObjects are never called and a somewhat larger penalty if they
are called, but it's worth it to avoid very confusing behavior as
discussed in depth in qpdf#507.

I thought /EFF was supposed to be used as a default for decrypting
embedded file streams, but actually it's supposed to be advice to a
conforming writer about handling new ones. This makes sense since the
findAttachmentStreams code, which is not actually needed, was never
right.

Refactor QPDF_Stream to use stream filter classes to handle supported
stream filters as well.

StreamDataProvider::provideStreamData now has a rich enough API for it
to effectively proxy to pipeStreamData.