diff --git a/openbr/plugins/cmake/jni.cmake b/openbr/plugins/cmake/jni.cmake
deleted file mode 100644
index 41cc5ba..0000000
--- a/openbr/plugins/cmake/jni.cmake
+++ /dev/null
@@ -1,12 +0,0 @@
-set(BR_WITH_JAVA OFF CACHE BOOL "Use Java Code")
-
-if (${BR_WITH_JAVA})
-	find_package(JNI REQUIRED)
-        find_package(JAVA REQUIRED)
-	set(BR_THIRDPARTY_LIBS ${BR_THIRDPARTY_LIBS} ${JNI_LIBRARIES})
-
-	include_directories(${JAVA_INCLUDE_PATH})
-	include_directories(${JAVA_INCLUDE_PATH2})
-else()
-  set(BR_EXCLUDED_PLUGINS ${BR_EXCLUDED_PLUGINS} plugins/core/jni.cpp)
-endif()
diff --git a/openbr/plugins/core/jni.cpp b/openbr/plugins/core/jni.cpp
deleted file mode 100644
index 202cd20..0000000
--- a/openbr/plugins/core/jni.cpp
+++ /dev/null
@@ -1,103 +0,0 @@
-//Need to include location of jvm.dll (jdk version) and its parent directory in the environment variables
-
-#include <limits>
-#include <openbr/plugins/openbr_internal.h>
-#include <openbr/core/resource.h>
-#include <jni.h>
-
-namespace br
-{
-
-/*!
- * \ingroup initializers
- * \brief Initialize JNI
- * \author Jordan Cheney \cite jcheney
- */
-class JNIInitializer : public Initializer
-{   
-    Q_OBJECT
-    public:
-        static JavaVM* jvm;
-        static JavaVMInitArgs vm_args;
-
-    void initialize() const
-    {
-        JNIEnv *env;
-        JavaVMOption options[1];
-
-        //Location of Java files
-        QByteArray classpath = QString("-Djava.class.path=").append(Globals->sdkPath).append(QString("/share/openbr/Java/jniLibraries/")).toLocal8Bit();
-        char *charClasspath = classpath.data();
-
-        options[0].optionString = charClasspath;
-        vm_args.version = JNI_VERSION_1_6;
-        vm_args.nOptions = 1;
-        vm_args.options = options;
-        vm_args.ignoreUnrecognized = JNI_FALSE;
-
-        JNI_CreateJavaVM(&jvm, (void**)&env, &vm_args);
-
-        Globals->abbreviations.insert("JNIHelloWorld","Open+JNI(HelloWorld)");
-    }
-
-    void finalize() const
-    {
-        jvm->DestroyJavaVM();
-    }
-};
-
-JavaVM *JNIInitializer::jvm;
-JavaVMInitArgs JNIInitializer::vm_args;
-
-BR_REGISTER(Initializer, JNIInitializer)
-
-/*!
- * \ingroup transforms
- * \brief Execute Java code from OpenBR using the JNI
- * \author Jordan Cheney \cite jcheney
- */
-class JNITransform : public UntrainableTransform
-{
-    Q_OBJECT
-    Q_PROPERTY(QString className READ get_className WRITE set_className RESET reset_className STORED false)
-    BR_PROPERTY(QString, className, "")
-
-    void project(const Template &src, Template &dst) const
-    {
-        (void)dst; //Eliminates a compiler warning.
-
-		JNIEnv *env;
-
-        //Attach current thread to the thread of the JavaVM and access env
-        JNIInitializer::jvm->AttachCurrentThreadAsDaemon((void**)&env, NULL);
-        if (JNIInitializer::jvm->GetEnv(reinterpret_cast<void**>(&env), JNI_VERSION_1_6) != JNI_OK) {
-            qFatal("Failed to initialize JNI environment");
-        }
-
-        //Convert QString to const char*
-        QByteArray tmpClass = className.toLocal8Bit();
-        const char* charClassName = tmpClass.constData();
-
-        //Call java method
-        jclass cls = env->FindClass(charClassName);
-        if (cls == NULL) { qFatal("Class not found"); }
-        jmethodID mid = env->GetStaticMethodID(cls, "project", "(Ljava/lang/String;)V");
-        if (mid == NULL) { qFatal("MethodID not found"); }
-
-        QByteArray tmp = src.file.name.toLocal8Bit();
-        const char* fileName = tmp.constData();
-
-        //Convert char* to java compatible string
-        jstring jfileName = env->NewStringUTF(fileName);
-
-        env->CallStaticObjectMethod(cls, mid, jfileName);
-
-        JNIInitializer::jvm->DetachCurrentThread();
-	}
-};
-
-BR_REGISTER(Transform, JNITransform)
-
-} // namespace br
-
-#include "jni.moc"